BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F06SP1|AL426071
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1259 1619 0.0
>3x_Contig1259
Length = 4915
Score = 1619 bits (816), Expect = 0.0
Identities = 826/828 (99%), Gaps = 1/828 (0%)
Strand = Plus / Minus
Query: 17 agctggaggagatgacggtactttgtgcttttacgattacaaaacaggacacaaatacca 76
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3975 agctggtggagatgacggtactttgtgcttttacgattacaaaacaggacacaaatacca 3916
Query: 77 aagtatgatgacaactgaagttgctggctcacttgaaagtgagcgatcgattttatgcag 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3915 aagtatgatgacaactgaagttgctggctcacttgaaagtgagcgatcgattttatgcag 3856
Query: 137 cacctttgatgtcacaggaacaagactcatcacaggggaaggagacaaaagcatcaaaat 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3855 cacctttgatgtcacaggaacaagactcatcacaggggaaggagacaaaagcatcaaaat 3796
Query: 197 atggaagcaagtccctgatgctacagaagatacattccctggcttgccgtggaatcccac 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3795 atggaagcaagtccctgatgctacagaagatacattccctggcttgccgtggaatcccac 3736
Query: 257 gttaatatctcaaagattctaatctagctggtgtctacttgcagcgacttatgtagaagt 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3735 gttaatatctcaaagattctaatctagctggtgtctacttgcagcgacttatgtagaagt 3676
Query: 317 ttgtagtttaactctattaggtccccgttttccatctatctagaatatttcagtctgcat 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3675 ttgtagtttaactctattaggtccccgttttccatctatctagaatatttcagtctgcat 3616
Query: 377 taattgcgaggtttgctctaactgtcatatgattacagtcacgtagtcaaggacagggaa 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3615 taattgcgaggtttgctctaactgtcatatgattacagtcacgtagtcaaggacagggaa 3556
Query: 437 cgtcaggttttcttgtatgtttgttcaagcatggtgtttgctttaatacggtaatctgaa 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3555 cgtcaggttttcttgtatgtttgttcaagcatggtgtttgctttaatacggtaatctgaa 3496
Query: 497 taaattaactgaaatttagcatcttcaaaatatttgaacttattagttacgcaataaacc 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3495 taaattaactgaaatttagcatcttcaaaatatttgaacttattagttacgcaataaacc 3436
Query: 557 aaatccaaaaacagagcacctctgtaaga-gaactagtaaggcaaggcaactgtttaaca 615
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3435 aaatccaaaaacagagcacctctgtaagaggaactagtaaggcaaggcaactgtttaaca 3376
Query: 616 aatattttgggcgagctcgctaatacatgagtcacggcgaagaaaaggaacctgggattc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3375 aatattttgggcgagctcgctaatacatgagtcacggcgaagaaaaggaacctgggattc 3316
Query: 676 cccagaaggttgacagcatcgatgagattttcgttggatgcaagtcatgggtactaaaag 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3315 cccagaaggttgacagcatcgatgagattttcgttggatgcaagtcatgggtactaaaag 3256
Query: 736 atggtcaagatcgtcttgctgaaattctatccattaacagcagaagagatccacctaagt 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3255 atggtcaagatcgtcttgctgaaattctatccattaacagcagaagagatccacctaagt 3196
Query: 796 tctacgtgcattatgaagacttcaataaacgtctagatgaatggatca 843
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3195 tctacgtgcattatgaagacttcaataaacgtctagatgaatggatca 3148
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5751
Number of Sequences: 1807
Number of extensions: 5751
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)